YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73811113, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLGAVLLL LALPSLGQET TEKPGALLPM PKGACAGWMA GIPGHPGHNG TPGRDGRDGI  60
   61 PGEKGEKGDT GLTGPKGDTG ESGVTGVEGP RGFPGIPGRK GEPGESAYVY RSAFSVGLET 120
  121 RVTVPNMPIR FTKIFYNQQN HYDVTTGKFH CNIPGLYYFS FHITVYLKDV KVSLYKKDKA 180
  181 VLFTYDQYQD KNVDQASGSV LLYLEKGDQV WLQAYGDEEN NGVYADNVND SIFTGFLLYH 240
  241 NIE

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	243	0.99