YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74001047
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGPLLCSQL SLGSLIPPAT FKEELTRGTA AFQGEWRTQR PVLLERPLPA GLAPRGRPSP  60
   61 KGASYRARKV LPRALAAGPP WARGPLKQPP VPQSLCAGIC PASPASLGLR LLQGSQGAAG 120
  121 AAAGPRRDCG EPACSLSPAE SYPSSSPIWF VDSDDPNLTS VLERLEDTKN NNSLRQQLKW 180
  181 LICELCRLYN LPKHLDVEML DQPIPTGQNG TTEEVTSEEE EDEEMAEDIE DLDHYEMKEE 240
  241 EPISGKKSED EGIEKENLAI LEKIRKTQRQ DHLNGAVSGS VQASDRLMKE LRDIYRSQSY 300
  301 KAGIYSVELI NDSLYDWHVK LQKVDPDSPL HSDLQILKEK EGIEYILLNF SFKDNFPFDP 360
  361 PFVRVVLPVL SGGYVLGGGA LCMELLTKQG WSSAYSIESV IMQINATLVK GKARVQFGAN 420
  421 KNQYNLARAQ QSYNSIVQIH EKNGWYTPPK EDG

Type	Start	End	Confidence
Signal Peptide	1	21	0.69
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	453	0.94