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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74000135
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGTSDMANK NEACSRNPGL LFPSLTEEGR QHPRSPEARS VKVSPVGRRA TAPGRTMACV  60
   61 RSSRARAPAL AVWLLCALHL AGTQAGPPPG AACLDRFTAG VPAFVLDTEA SVSNGATFLG 120
  121 SPTVRRGWDC VRACCTTQSC NLALVELQPD GGEDAIAACF LMNCLYEQNF VCKFAPREGF 180
  181 INYLTREVYR SYRELRTQGF GGSRIPKSWA GVDLKVQPQE PLVLKGVENT DWYLLQGDTD 240
  241 VRIEKSEPDQ VKLWGLKEGT YRFQLTGADS DKPESTANVT VTVLSAKQTE EYCLASNKVG 300
  301 RCRGSFPRWY YDPKEQICKS FVYGGCLGNK NNYLREEECK LACRDVQGPS MDRHRPVCSG 360
  361 TCHPTEFRCR NGCCIDSFLE CDDTPDCPDA SDEATCEKYT SGFEELQNIH FPSDKGHCVD 420
  421 LPDTGLCLEN IPRWYYNPFS ERCARFTYGG CYGNKNNFEE EQQCLASCRG ISKKDVFGLR 480
  481 RESPVPNIGS VEVVIAVLLV TCIVVVEVIT GDGIIKNQRK RFDRHRYRHH HHPQPPTPAS 540
  541 STVSTTEDTE HLVYNHTTRP L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle