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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73999688
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.24
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPPETTTKM ASVRFMVTPT KIDDIPGLSD TSPDLSSRSS SRVRFSSRES VPETSRSEPM  60
   61 SEMSGATTSL ATVALDPASD RNSNPQDVTE DDGHNKKARN AYLNNSNYEE GDEYFDRNLA 120
  121 LFEEEMDTRP KVSSLLNRMA NYTNLTQGAK EHEEAENITE GKKKPTKTPQ MGTFMGVYLP 180
  181 CLQNIFGVIL FLRLTWVVGT AGVLQAFAIV LICCCCTLLT AISMSAIATN GVVPAGGSYF 240
  241 MISRALGPEF GGAVGLCFYL GTTFAAAMYI LGAIEIFLVY IVPRAAIFRS EDALKESAAM 300
  301 LNNMRIYGTA FLVLMVLVVF IGVRYVNKFA SLFLACVIVS ILAIYAGAIK SSFAPPHFPV 360
  361 CMLGNRTLSS RHIDTCSKTK EINNMTVPSK LWGFFCNSSQ FFNATCDEYF VHNNVTSIQG 420
  421 IPGLASGVIT ENLWSNYLPK GEIIEKSSAR SSDVLGNLNH EYVLVDITTS FTLLVGIFFP 480
  481 SVTGIMAGSN RSGDLKDAQK SIPIGTILAI LTTSFVYLSN VVLFGACIEG VVLRDKFGDA 540
  541 VKGNLVVGTL SWPSPWVIVI GSFFSTCGAG LQSLTGAPRL LQAIAKDNII PFLRVFGHSK 600
  601 ANGEPTWALL LTAAIAELGI LIASLDLVAP ILSMFFLMCY LFVNLACALQ TLLRTPNWRP 660
  661 RFRYYHWALS FMGMSICLAL MFISSWYYAI VAMVIAGMIY KYIEYQGAEK EWGDGIRGLS 720
  721 LSAARFALLR LEEGPPHTKN WRPQLLVLLK LDEDLHVKHP RLLTFASQLK AGKGLTIVGS 780
  781 VIVGNFLENY GEALAAEQTI KHLMEAEKVK GFCQLVVAAK LREGISHLIQ SCGLGGMKHN 840
  841 TVVMGWPNGW RQSEDARAWK TFIGTVRVTT AAHLALLVAK NISFFPSNVE QFSEGNIDVW 900
  901 WIVHDGGMLM LLPFLLKQHK VWRKCSIRIF TVAQLEDNSI QMKKDLATFL YHLRIEAEVE 960
  961 VVEMHDSDIS AYTYERTLMM EQRSQMLRHM RLSKTERDRE AQLVKDRNSM LRLTSIGSDE1020
 1021 DEETETYQEK VHMTWTKDKY MASRGQKAKS MEGFQDLLNM RPDQSNVRRM HTAVKLNEVI1080
 1081 VNKSHEAKLV LLNMPGPPRN PEGDENYMEF LEVLTEGLER VLLVRGGGSE VITIYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle