YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57107809
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPWQECMD YAVTLARQAG EVVREAIKNE MNVMIKSSPA DLVTATDQKI EKMLLSSIKE  60
   61 KYPSHSFIGE ESVAAGEKSI LTDSPTWIID PIDGTTNFVH RFPFVAVSIG FTVNKKMEFG 120
  121 IVYSCLEDKM YTGRKGKGAF CNGQKLQVSQ QEDITKSLLV TEFGSSRAPE TVRIVLSNLE 180
  181 KLLCIPIHGI RGVGTAAVNM CLVAAGVADA YYEMGIHCWD MAGAGIIVTE AGGVLMDVTG 240
  241 GPFDLMSRRI IAANSKTLAE RIAKEIQVIP LQRDDEE

Type	Start	End	Confidence
Cytoplasmic	1	186	0.70
Transmembrane Helix	187	208	0.63
Non-Cytoplasmic	209	220	0.78
Transmembrane Helix	221	241	0.64
Cytoplasmic	242	277	0.66