YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73999473
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGDGVGNVT GCEEYNHRST APRDPQADAS GPADGQDTLS WLRPRPAPHH PGFHPRLALW  60
   61 SRVGIDLGGD PTTPAARHPP PSRRRGRTDL RGFSGPRLVA PLRSAGSRLA AGGGGGIVEV 120
  121 FYKMTLNARI KFRSKDVPGV GIDGVLLATS GRPRAPDLGG RRSSAACATA TSAVPSEHFE 180
  181 KLHEIFRGLH EDLRGVPERL LGMAGTEEKK QLIRDFDEKQ QEANATLAEM EEELRYAPLS 240
  241 FRNPMMSKLR TYRKDLAKPH REVSSTPLTA TPGGRGDMKY GSYAVENEHM TRLQSQRALL 300
  301 LQGTDSLNRA TRSIERSHRI ATETDQIGSE IIEELGEQCD QLERTKSRLV NTSDNLSKSR 360
  361 KILRSMSRKV TTSKQLLSIV ILLELAILGG LVYYKFFHKH

Type	Start	End	Confidence
Non-Cytoplasmic	1	375	0.67
Transmembrane Helix	376	397	0.87
Cytoplasmic	398	400	0.59