YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73998671
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVGRFLR ASIARHVSAI PWGISASAAL RPAASRRTCL TNVLWSGSGQ AKFAFSTSSS  60
   61 YHAPAVTQHA PYFKGTAVVN GEFKDLTLDD FKGRYLVLFF YPLDFTFVCP TEIVAFSDKA 120
  121 KEFHDVNCDV VAVSVDSHFT HLAWINTPRK NGGLGHMNIA LLSDLTKQIS RDYGVLLEGP 180
  181 GIALRGLFII DPNGVIKHLS VNDLPVGRSV EETLRLVKAF QFVETHGEVC PANWTPDSPT 240
  241 IKPHPTASKE YFEKVNQ

Type	Start	End	Confidence
Signal Peptide	1	28	0.78
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	257	0.97