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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73998635
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEEILMSGR WRLAQSEKRH TQEQVGRIRE DLLEEMVVLN PMRPFFVNME HCLDDSPRVL  60
   61 APPPLSFSVS ARLPPAAGPV PGIPRPRGAR ELAGPGAGGP HTHQVHVCAR VCGPARAHAA 120
  121 LPLGAPGRGQ APPGTARREG ESSLCPRVWD VRARDVWGAP RVARLPLGDR LKERGRKSRH 180
  181 VGSEDRCRSA HNHQVPRSYH SQSQGPFNVT LTASREKGQD SQQVTVEGDE GDCYASRMCR 240
  241 HFSEWHQPPY NDLMAPSMAL GFPMLNATPL RNSFLSYKPD EGKPQKKDID NLELWSAALS 300
  301 VPHLNSGDSG YLRCQPPTSF PMNAVESPEG QELQKMGSGA WDNPAYSGPP SPRGTLKICT 360
  361 ISSAMPPQPQ IQKPEDGPQE KAYRTLVSSC CFQICRGIRG LWGTTLTENT AENRELYVKT 420
  421 TLRELLVYIV FLVDICLLTY GMTSSSAYYY TKVMSELFLH TPSDTGVSFQ AISSMADFWD 480
  481 FAQGPLLDSL YWTKWYNNQS LGHGSHSFIY YENLLLGVPR LRQLRVRNDS CVVHEDFRED 540
  541 ILSCYDVYSP DKEEQLPFGP LNGTAWTYHS QDELGGSSHW GRLTSYSGGG YYLDLPGSRQ 600
  601 ASAEALQDLQ EGLWLDRGTR VVFIDFSVYN ANINLFCVLR LVVEFPATGG AIPSWQIRTV 660
  661 KLIRYVSNWD FFIIGCEIIF CIFIVYYMVE EILELHIHRL HYLSSIWNIL DLVVIMLSIV 720
  721 AVGFHIFRTL EVNRLMGKLL QQPNMYADFE FLAFWQTQYN NMNAVNLFFA WIKIFKYISF 780
  781 NKTMTQLSST LARCAKDILG FAVMFFIVFF AYAQLGYLLF GTQVENFSTF IKCIFTQFRI 840
  841 ILGDFDYNAI DNANRILGPA YFVTYVFFVF FVLLNMFLAI INDTYSEVKE ELAGQKDELQ 900
  901 LSDLLKQGYN KTLLRLRLRK ERVSDVQKVL QGGEQEIQFE DFTNTLRELG HAEHEITELT 960
  961 AAFTRFDQDG NHILDKKEQE QMQQDLEEKR VVLNAEIENL GQSIVSSSPG ESGPEATRAD1020
 1021 GWVSGEEFYT LTRRVLQLET VLEGVMSQVD AVGSKLEMLE RKEQLASSPG MGDQGIWEHL1080
 1081 QPTSPVTPDP WGVQGGQESE FPGGREGEAL EEMRLSHIGD YSVAEELGVS DLSIQGKNHE1140
 1141 GSVEKPAPDI SLNTGNCESC KQAHRWNLRR IRQRNDSRIL RSLE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle