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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73998234
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYPLAWLLH SARPSTFRSV LGARLPLPER LCGFQEKSYS KMNNPAIKRL GNHIIKSPED  60
   61 KREYRGLELA NGIKVLLISD PTTDKSSAAL DVHIGSLSDP PNIAGLSHFC EHMLFLGTKK 120
  121 YPKENEYSQF LSEHAGSSNA FTSGEHTNYY FDVSHEHLEG ALDRFAQFFL CPLFDESCKD 180
  181 REVNAVDSEH EKNVMNDAWR LFQLEKATGN PKHPFSKFGT GNKYTLETRP NQEGIDVRQE 240
  241 LLKFHSTYYS SNLMAICVLG RESLDDLTNL VVKLFSEVEN KNVPLPEFPE HPFQEEHLKQ 300
  301 LYKIVPIKDI RNLYVTFPIP DLQKYYKSNP GHYLGHLIGH EGPGSLLSEL KSKGWVNTLV 360
  361 GGQKEGARGF MFFIINVDLT EEGLLHVEDI ILHMFQYIQK LRAEGPQEWV FQECKDLNAV 420
  421 AFRFKDKERP RGYTSKIAGI LHYYPLEEVL TAEYLLEEFR PDLIEMVLDK LRPENVRVAI 480
  481 VSKSFEGKTD RTEEWYGTQY KQEAVPDEVI KILSLEKEAH PYPSLIKDTA MSKLWFKQDD 540
  541 KFFLPKACLN FEFFSPFAYV DPLHCNMAYL YLELLKDSLN EYAYAAELAG LSYDLQNTIY 600
  601 GMYLSVKGYN DKQPILLKKI IEKMATFEID EKRFEIIKEA YMRSLNNFRA EQPHQHAMYY 660
  661 LRLLMTEVAW TKDELKEALD DVTLPRLKAF IPQLLSRLHI EALLHGNITK QAALGIMQMV 720
  721 EDTLIEHAHT KPLLPSQLVR YREVQLPDRG WFVYQQRNEV HNNCGIEIYY QTDMQSTSEN 780
  781 MFLELFCQII SEPCFNTLRT KEQLGYIVFS GPRRANGIQG LRFIIQSEKP PHYLESRVEA 840
  841 FLITMEKSIE DMTEEAFQKH IQALAIRRLD KPKKLSAECA KYWGEIISQQ YNFDRDNTEV 900
  901 AYLKTLTKED IIKFYKEMLA VDAPRRHKVS VHVLAREMDS CPVVGEFPCQ NDINLSQAPA 960
  961 LPQPEVIQNM TEFKRGLPLF PLVKPHINFM AAKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle