YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73997815
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLGQAQEA GKPGNLCSGS GVFSRLRAPS QPNQQAHDLL VSRSPMVFQN GTLDLLPSAH  60
   61 TPTPAPACQA SEILLSSKML SSQRRKRPKA RPGPGNMENK MRMPGSPNLR RSQPINLNHY 120
  121 ATKKSVAESM LDVALFMSNA MRLKAVLEQG PSSHYYTTLV TLISISLLLQ VVIGILLVVI 180
  181 AQLNLNEVEK QWQLNQLNNT ATTLVFITVV VNVFITAFGA HKTGFLAART SRNLL

Type	Start	End	Confidence
Cytoplasmic	1	158	0.89
Transmembrane Helix	159	181	0.90
Non-Cytoplasmic	182	200	0.82
Transmembrane Helix	201	221	0.92
Cytoplasmic	222	235	0.78