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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73997755
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPPGSLSE SQGDNGRGTR AQNAALTPTL HDPCSPRLMK GECREEEGLG PKPAAPQQPT  60
   61 EEEEALIEFH RSYRDLFQFF CNNTTIHGAI RLVCSKHNRM KTAFWAVLWL CAFIMMYWQF 120
  121 GQLFGEYFSY PVSLNINLNS DKLVFPAVTI CTLNPYRYTQ VKEELEELDR ITEQTLYDLY 180
  181 KYNSSNTLGA HPRGRRDLRE PWPHPLQRLR VPAPPSGARR ARRAASSVQD NNPQVNRKDW 240
  241 KIGFQLCNQN KSDCFYQTYS SGVDAVREWY RFHYINILSR LPDTSLSSGE DMLDNFIFAC 300
  301 RFNQASCNQA NYSHFHHPMY GNCYTFNGKN NSNLWMSSMP GIKNGLSLTL RTEQNDFIPL 360
  361 LSTVTGARVM VHGQDEPAFM DDGGFNLRPG METSISMRKE ALDRLGGNYG DCTKNGSEVP 420
  421 VENLYRSKYT QQVCIRSCFQ ENMIKQCGCA YIFYPLPKNA EFCDYRKHNS WGYCYYKLQD 480
  481 AFSSDHLGCF TKCRKPCSVT SYQLSAGYSR WPSVTSQDWI FQMLSRQNNY TINNKRNGVA 540
  541 KLNIFFKELK YKTNSESPSV TMVTLLSNLG SQWSLWFGSS VLSVVEMAEL IFDLLVITFL 600
  601 MLLRRFRSRY WSPGRGGRGA QEVASTPASS FPSHFCPHST SLSSSLPGPA ISPALTAPPP 660
  661 AYATLGPCPS PSSLAGAHSS AYTLGKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle