YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73997604
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFMSYPSS PVLPLSLLFL QVTNIFFNSY TLFESIACCH KVPEYRKGYF LLPTGASLPS  60
   61 ATAQASETNP QDHGETMKSL LLLSILAALA VAALCYESHE SMESYEINPF INRRNANTFI 120
  121 SPQQRWRAKA QERIRETTKP AYELNREACD DFKLCERYAM VYGYNAAYNR YFRHRRGGK

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.54
Transmembrane Helix	12	32	0.54
Cytoplasmic	33	78	0.37
Transmembrane Helix	79	96	0.59
Non-Cytoplasmic	97	179	0.54