YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73997496
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHARFPPAEV IRDSPAHPQD GKGREKEPFQ SRFTPKPLPR RLKEPTPPAR PPRSPTSERR  60
   61 PLRTTTYSLQ PLRNENFPPP GFPLSPAASI RPSGEVPSTN CKGQPSLIGE GPMGSSLEAR 120
  121 VGGGCVFPED VAALPGAVSR LLSSRLCFTP WTPRGAVAAA LPAAAMISLT DTQKIGMGLT 180
  181 GFGVFFLFFG MILFFDKALL AIGNVLFVAG LAFVIGLERT FRFFFQKHKM KATGFFLGGV 240
  241 FVVLIGWPLI GMIFEIYGFF LLFRGFFPVV IGFIRRVPVL GSLLNLPGIR SFVDKVGESN 300
  301 NMV

Type	Start	End	Confidence
Cytoplasmic	1	174	0.75
Transmembrane Helix	175	194	0.89
Non-Cytoplasmic	195	199	0.70
Transmembrane Helix	200	221	0.87
Cytoplasmic	222	231	0.88
Transmembrane Helix	232	251	0.93
Non-Cytoplasmic	252	259	0.56
Transmembrane Helix	260	279	0.76
Cytoplasmic	280	303	0.81