YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RSMG_SODGM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRLESLLA QADMALTSAQ KEKLLGYVAL LHKWNKAYNL TSVRSPEQML VRHIMDSIVV  60
   61 NPHLRGDRFI DVGTGPGLPG IPLAIVRPDA HFTLLDSLGK RICFLRQVQH ELGLDNITAV 120
  121 QSRVESFAPP AGFDGVISRA FASLGDMLTW CAALPRKEEG RFYALKGQLS EEELNALPAG 180
  181 FRVESVIGLQ VPCLEGERHI VVLAAN

Type	Start	End	Confidence
Signal Peptide	1	19	0.63
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	206	0.99