YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85058784, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHMRKLALSL VMIGIAASQA HAEELTGTLK KIKDNGVIVV GHRESSIPFS YYDNQQKVVG  60
   61 YSQDYSNAIV DAVKKKIDAP NLQVKYLPIT SSNRIPLLQN GTYDFECGST TNNLERQKQV 120
  121 DFSDTLFIIG TRLAVKKGAL IKDFSDLAGK TVVVTAGTTS EVLLNKLNDE KQMKMRIIST 180
  181 KDHGDSFRTL ENGRAVAFMM DDALLAGEHA KSRKPDQWDI VGTPQSKEAY GCMLRKDDAQ 240
  241 FKTLMDDTIA HIQTSGEAEK LYDKWFKQPI PPKNLNMNFA MSDDMQALFK SPNDKAVN

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	298	0.99