YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85058352, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQALLVIFL LVAVGLVALI MLQQGKGADM GASFGAGASG TLFGSSGSGN FMTRMTAVLA  60
   61 TLFFVLSLVL GNLSSNHGQK GSQWDNLNQA QQADKAPAEA PAKPGNDIPQ

Type	Start	End	Confidence
Cytoplasmic	1	4	0.66
Transmembrane Helix	5	25	0.75
Non-Cytoplasmic	26	50	0.67
Transmembrane Helix	51	74	0.75
Cytoplasmic	75	110	0.71