YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85058136, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRYHRHGGW IIWLSFLIAI VLQIMPWPPQ LYLFRPSWLN LLLIYWVMAL PHRVNVGTGF  60
   61 ILGLIMDLIL GSTLGVRALA LSILAYLVVF KFQLFRNMAF WQQALIVILL SLTTQVIVFW 120
  121 AEFLVINISF RPEIFWSSVV DGVLWPWLFL LMRKIRRQFA VQ

Type	Start	End	Confidence
Cytoplasmic	1	8	0.71
Transmembrane Helix	9	28	0.93
Non-Cytoplasmic	29	59	0.63
Transmembrane Helix	60	90	0.73
Cytoplasmic	91	99	0.75
Transmembrane Helix	100	121	0.88
Non-Cytoplasmic	122	133	0.64
Transmembrane Helix	134	151	0.93
Cytoplasmic	152	162	0.84