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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UBIB_SODGM
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFGELRRLY LIIGVMLSYG LDELIPKTRL TLPLRLGRNL LFWMPNNHAQ RMLGERLRLA  60
   61 LQELGPVWIK FGQMLSTRRD LFPPAIADQL AMLQDRVQPF DGALARAHIE RSMGQPLETW 120
  121 FDDFQQEPLA SASIAQVHTA RLKNGQEVVI KVIRPDILPM IKADMRLMYR LASWVPHLLP 180
  181 DGRRLRPVEV VLEYEKTLLD ELNLLREAAN AIQLRRNFDG SPMLYIPEVY PDYCSETMMV 240
  241 MERIYGVPVN DVAALEKQGT NMKLLAERGV QVFFTQVFRD SFFHGDMHPG NIFVSFEHPE 300
  301 NPQYIGIDCG IVGSLNKEDK RYLAENFIAF FNRDYRKVAE LHVDSGWVPP DTNVEDFEFA 360
  361 IRTVCEPIFE KPLAEISFGH VLLNLFNTAR RFNMEVQPQL VLLQKTLLYI EGVGRQLYPQ 420
  421 LDLWKTAKPF LEEWIKDQMG LPAILRALKE KAPYWAEKLP ELPELVYDGF KQHRLLQKSV 480
  481 DRLTVEMRVH HVRQSQSRFL FGIGATLLLI GTFLMTQGAD EGSLPAWLMA AGTVSWIIGW 540
  541 KRTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle