YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84778580, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILINLGRLL MLVVWSFLLF NLIQPFPKPL KYFLDIGLFF MVVMHALQLT LQKATLTKDE  60
   61 AKPGAAFQTR VFLFGVFEMV AWQKKQRAQR LSDRGR

Type	Start	End	Confidence
Cytoplasmic	1	5	0.61
Transmembrane Helix	6	26	0.76
Non-Cytoplasmic	27	31	0.64
Transmembrane Helix	32	51	0.76
Cytoplasmic	52	96	0.54