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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73997258
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLLLPLLL ASLFPSSSSN KANKHKPWIE AEYQGIVMEN DNTVLLNPPL FALDKDAPLR  60
   61 YAGEICGFRL HGSGVPFEAV ILDKATGEGL IRAKEPVDCE AQKEHTFTIQ AYDCGEGPDG 120
  121 ANTKKSHKAT VHVRVNDVNE FAPVFVERLY RAAVTEGKLY DRILRVEAID GDCSPQYSQI 180
  181 CYYEILTPNT PFLIDNDGNI ENTEKLQYSG ERLYKFTVTA YDCGKKRAAD DAEVEIQVKP 240
  241 TCKPSWQGWN KRIEYAPGAG SLALFPGIRL ETCDEPLWNI QATIELQTSH VAKGCDRDNY 300
  301 SERALRKLCG AATGEVDLLP MPGPNANWTA GLSVHYSQDS SLIYWFNGTQ AVQVPLGGTA 360
  361 GLGSGPQDSL SDHFTLSFWM KHGVTPNKGK KEEETIMCNT VQNEDGFSHY SLTVHGCRIA 420
  421 FLYWPLLESA RPVKFLWKLE QVCDDEWHHY ALNLEFPTVT LYADGISFDP ALIHDNGLIH 480
  481 PPRREPALMI GACWTEEKNK EKEKGGDNNT DTTQGDPLPI HHYFHGYLAG FSVRSGRLES 540
  541 REVIECLYAC REGLDYRDFE SLGKGMKVHV NPSQSLLTLE GDDVETFNHA LQHVAYMNTL 600
  601 RFATPGVRPL RLTTAVKCFS EESCVSIPEV EGYVVVLQPD APQILLSGTA HFARPAVDFE 660
  661 GPEGIPLFPD LQITCSISHQ VEAKKDESWQ GTVTDTRMSD EIVHNLDGCE ISLVGDDLDP 720
  721 ERESLLLDMA SLQQRGLELT NTSAYLTIAG VESITVYEEI LRQAHYRLRH GAALYARKFR 780
  781 LSCSEMNGRY SSNEFIVEVN VLHSMNRVAH PSHMLSSQQF LHRGHQPPPE MAGHSLASSH 840
  841 RNSMVPSAAT LIIVVCVGFL VLMVILGLVR IHSLHRRVSG AGGPPEASSD PKDPDLFWDD 900
  901 SALTIIVNPM ESYQNRQACV AGAAGGQQED EDSSDSEAAD SPSSNERRII ETPPHRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle