YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EG11714
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHFDVAIIG LGPAGSALAR KLAGKMQVIA LDKKHQCGTE GFSKPCGGLL APDAQRSFIR  60
   61 DGLTLPVDVI ANPQIFSVKT VDVAASLTRN YQRSYININR HAFDLWMKSL IPASVEVYHD 120
  121 SLCRKIWRED DKWHVIFRAD GWEQHITARY LVGADGANSM VRRHLYPDHQ IRKYVAIQQW 180
  181 FAEKHPVPFY SCIFDNSITN CYSWSISKDG YFIFGGAYPM KDGQTRFTTL KEKMSAFQFQ 240
  241 FGKTVKSEKC TVLFPSRWQD FVCGKDNAFL IGEAAGFISA SSLEGISYAL DSTDILRSVL 300
  301 LKQPEKLNTA YWRATRKLRL KLFGKIVKSR CLTAPALRKW IMRSGVAHIP QLKD

Type	Start	End	Confidence
Signal Peptide	1	19	0.57
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	354	0.99