YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73996376
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLGVPGNC SAGFQRRFLS PAGVCLAAAR LSSGTVERLA GPRRTAGRRR CGARADPQRR  60
   61 GHSSPRRATR WSRPRMRRAF LWLFPPTTTP APLGRLRSGS SSPATAPHPL KMYACAKFVS 120
  121 TPFLVRSTSQ LLSRSLSAVV LKPPETLTDK SLSSLTAPHP LTSLIPSRSF QTSAISRDID 180
  181 TAAKFIGAGA ATVGVAGSGA GIGTVFGSLI IGYARNPSLK QQLFSYAILG FALSEAMGLF 240
  241 CLMVAFLILF AM

Type	Start	End	Confidence
Cytoplasmic	1	184	0.57
Transmembrane Helix	185	213	0.79
Non-Cytoplasmic	214	225	0.47
Transmembrane Helix	226	250	0.91
Cytoplasmic	251	252	0.44