YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73995426
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPPPRGAE RDLFRDTWVR YLGYANEVGE AFRSLVPAAV VWLSYGVSSS YVLADAIDKG  60
   61 KKAGDVPSPE AGRSTRVTVA VVDTFVWQAL ASVAIPGFTI NRVCAASLYI LGTATRWPLS 120
  121 VRKWTTTALG LLVIPVIIHP IDRSVDFLLD SSLRKLYPSV EKPSSS

Type	Start	End	Confidence
Cytoplasmic	1	30	0.63
Transmembrane Helix	31	45	0.42
Non-Cytoplasmic	46	88	0.63
Transmembrane Helix	89	111	0.58
Cytoplasmic	112	123	0.61
Transmembrane Helix	124	141	0.76
Non-Cytoplasmic	142	166	0.82