YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73995360
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIPPNSHLT DGKTEIQTSF VIFPPQSIPT TLRLPAHLAK DSPALASPWP PNSPAHSRPP  60
   61 CFRDFLYLRP GTFSSVALSQ EEVCSAAGSL ASSSPAADSA SRSRPEHRDE AVNPHSTPSV 120
  121 PRSCSLATEY VWGAHPEVQM TLMPMASVMA VTEPKWVSVW GRFLWVILLS MVLGSLLALL 180
  181 LPLGTLEEQC LTVLKGFYLL RSKLDRVQHA VTKCTSPSTE LSVTSRDAAL RVVKTRASPA 240
  241 GKLEAKAALN QALEMKRQGK REKAHKLFLH ALKMDPDFVD ALNEFGIFSE EDKDIIQADY 300
  301 LYTRALTISP YHEKALVNRD RTLPLVEEID QRYFSIIDSK VKKVMSIPKG NSALRRVMEE 360
  361 TYYHHIYHTV AIEGNTLTLS EIRHILETRY AVPGKSLEEQ NEVIGMHAAM TYINTTLVSR 420
  421 IGSVTISDVL EIHRRVLGYV DPVEAGRFRT TQVLVGHHIP PHPQDVEKQM QEFVQWLNSE 480
  481 DAMNLHPVEF AALAHYKLVY IHPFIDGNGR TSRLLMNLIL MQAGYPPITI RKEQRSEYYH 540
  541 VLEVANEGDV RPFIRFIAKC TETTLDTLLF ATTEYPVALP EAKPNHSGFK ETLPVKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle