YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73995271
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERAPKPETA EMLELSDQTF KTTMINMLKA LMGKVDSMQG QMGNRRQHNN RTTQGETWCP  60
   61 GEAPGGWSAA EAGAEAGGSG GEGRPERGEG ARRAVMCPCP LHRGRGPPAV CACSAGRLAL 120
  121 RSSAAQLTAA RLKALGDELH QRTMWRRRAR SRRAPAPRAL PTYWPWLCAA AQVAALAAWL 180
  181 LGRRNL

Type	Start	End	Confidence
Cytoplasmic	1	159	0.82
Transmembrane Helix	160	181	0.90
Non-Cytoplasmic	182	186	0.76