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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73995172
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSCHCLCSV PQWISAGVTV SPSCPRPPLR SAGQGSASPP CTGPLGGLHP HTPATPRSCP  60
   61 DIAPAPAPGA PLGSAWHTLL PIFVVWSRRS VLAPTSLIRE AFVDHLPRAE TTSGSPYSLP 120
  121 LQFLSTVPRT RISLEPAFQG LLRGLRKPEL SEGDGRGAVA AGEVALGGGS QRSLPAGPAM 180
  181 VRRLGWLVLY GLAVLLLSCL LFLKKEAKPV GGSRAHQPFW APPGPRRSQC PPNRTVANIS 240
  241 LSLPSRHRLF LTYRHCRNFS ILLEPSGCAE DTFLLLAIKS QPGHVERRAA IRSTWGRVGG 300
  301 WARGRRLKLV FLLGVAGPAP PAQLLAYESR EFDDILQWDF AEDFFNLTLK ELHLQRWVAV 360
  361 ACSQTRFMLK GDDDVFVHVP NVLEFLDGWD PAQDLLVGDV IRQALPNRNT KVKYFIPPSM 420
  421 YRARHYPPYA GGGGYVMSRA TVQRLQAAVE EAELFPIDDV FVGMCLRKLG VSPMHHAGFK 480
  481 TFGIRQPLNP LDPCLYRGLL LVHRLSPMEM WTMWALVTDE GLRCAAAPLP QLRGVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle