YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73994206
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIGPKKESK SSWCSPRFPA AGFIQEFGKA MMTEAGGFEA EEPVCRGPQF PHVGRGGAGK  60
   61 CIGARREDGV APEHQALRLA PVGILLLMVG PPCGPWEGRG GDAGDTLVAV HHLLVATACQ 120
  121 DADYGALLQD LCLARFKVSM EAIGKTLWCD WAKTIGSYGE LTDCTRHVAD QLDCFWPNAA 180
  181 VHKFFVAVHQ RYFKNCPASG RAVRDPPRSI LCPFIVVPIL VTLLVTMLMV WRSKRPEGIV 240
  241

Type	Start	End	Confidence
Non-Cytoplasmic	1	209	0.51
Transmembrane Helix	210	231	0.93
Cytoplasmic	232	240	0.49