YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73993512
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIWLLLLAA GICMGNVKSQ DTCRQGHPGI PGNPGHNGLP GRDGRDGAKG DKGEAGEPGH  60
   61 PGGPGKDGMN GEKGERGADG KVEAKGIKGD QGSRGPPGKH GPKGLVGPMG EKGLRGETGP 120
  121 QGQKGDKGGV GPSGPEGLKG STGPSGPMGL PGPMGPIGKP GPKGDAGPLG PQGEPGVRGM 180
  181 RGWKGDRGEK GKIGETPVLP KSAFTVGLTV LSKFPTSDVP IKFDKILYNE FNHYDVATGK 240
  241 FTCHVAGVYY FTYHITVFSR NVQVSLVKNG VKILHTKDSY MSSEDQASGG IVLPLKLGDE 300
  301 VWMQVTGGER FNGLFADEDD DTTFTGFLLF SSQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	333	0.99