YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73993235
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIALLLQLAV LGVALAAAAL TLISFVAFIT ATKMPHLHQH EEEKFFLNAK GQKETLPSVW  60
   61 DSPTKQLSVV VPSYNEEKRL PVMMDEALGY LEKRQKQDPT FTYEVIVVDD GSKDQTSKVA 120
  121 FKYCQKYGSD KVRVITLVKN RGKGGAIKMG IFSSRGEKIL MADADGATQF PDIEKLEKGL 180
  181 NDLQPWPEQM AIACGSRAHL EKESIAQRSY FRTLLMYGFH FLVWFLCVKG IRDTQCGFKL 240
  241 FTREAASRTF SSLHIERWAF DVELLYIAQF FKIPIAEIAV NWTEIEGSKL VPFWSWLQMG 300
  301 KDLLFIRLRY LTGAWRLEQT GKMN

Type	Start	End	Confidence
Signal Peptide	1	19	0.93
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	324	0.91