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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73992736
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGPSPKAAP CGLPERGSHC PPRPTEAAAS PSAGTTPASG HQMMPGMSSE PRRRVEWGSR  60
   61 AVTGPANVSC GALVNMLLGQ DLVNGSVSFL SSHVETRAHA EERLLKTLFS GYNKWSRPVA 120
  121 NISDVVLVHF GLSIAQLIDV DEKNQMMTTN VWVKQEWHDY KLRWDPADYE NVTSIRIPSE 180
  181 LIWRPDIVLY NNADGDFAVT HLTKAHLFYD GRVQWTPPAI YKSSCSIDVT FFPFDQQNCT 240
  241 MKFGSWTYDK AKIDLVSMHS RVDQLDLWES GEWVIVDAVG TYNTRKYECC AEVYPDITYA 300
  301 FVIRRLPLFY TINLIIPCLL ISCLTVLVFY LPSECGEKIT LCISVLLSLT VFLLLITEII 360
  361 PSTSLVIPLI GEYLLFTMIF VTLSIVITVF VLNVHHRSPR THTMPAWVRR VFLDVVPRLL 420
  421 FMKRPSVVKD NCRRLIESMH KMASAPGFWP EPEGEPGVPS GTQSRGPSRT PSFCGPVDEL 480
  481 AKPPPACKSP SGQAPALRPS EAEEASPRPS PDSCRPLTKA RSLSVQHVSS PPEGAEDGVR 540
  541 CRSRSIQYGG PQDAAASEAG GPVAGSPALL KASSAELPAP EQPSPCKCRC KKEPSPSAVP 600
  601 KARGTKAPPR HLPLSPALTR AVEGVQYIAD HLKAEDTDFS VKEDWKYVAM VIDRIFLWVF 660
  661 IIVCLLGTAG LFLPPWLAGM I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle