YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73992611
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEELALLGP AGRVGARVRP RAAWVLGATA PCAPPPLFLP PLRRGPDALL LRAVRGDSGG  60
   61 RQDPSKIIAT TGRAVSSGQE EKQSKSQQLR KVFQEYGAVA VSLHIGISLV SLGIFYTVVS 120
  121 SGVDMSAVLL KLGFKESLVQ SKMAAGTSTF VVAYAIHKLF APVRISITLV SVPFIVRYFR 180
  181 KVGFFKPPAA KP

Type	Start	End	Confidence
Cytoplasmic	1	95	0.73
Transmembrane Helix	96	119	0.84
Non-Cytoplasmic	120	154	0.66
Transmembrane Helix	155	179	0.68
Cytoplasmic	180	192	0.85