YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73991505, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLEVLFAS VAPAITSAQD ALVCFLHWEV VTHGYYSVGT GDQPGPNDKK SELLPAEWNS  60
   61 NKDLYVLRYE SKDGSRKLLV KAVTVENSMI INVLEFGSQQ VSDLTLNLDD YIDSEHLGDF 120
  121 HRTYKNSEEL RSRIASGIIT PIHEHWDKAS VSSLHREFPP ATAREVDPLR IHPQHPHTSR 180
  181 QPPWCDPLGP FAVGGEDLDP FGCRRGGMIV DPLRSGFPRA LIDPSSGLPN RLPPGAVPPG 240
  241 ARFDPFGPIG TSPSGPNPDH LPPPGYDDMY L

Type	Start	End	Confidence
Signal Peptide	1	18	0.92
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	271	0.99