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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73990737
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSESQMDI TDISTPRPKK QRWTSLEISL SVLVLLLTII AVTMIALYAT YDDGICKSSD  60
   61 CIKSAARLIQ NMDATAEPCT DFFKYACGGW LKRNVIPETS SRYSNFDILR DELEVVLKDV 120
  121 LQEPKTEDIV AVQKAKTLYR SCINESAIDS RGGQPLLSLL PDIYDWPVAT DNWEQTYGTS 180
  181 WTAEKSIAQL NSKYGKKVIL NFFVGTDDKN SVNHIIHIDQ PRLGLPSRDY YVCTGIYEEA 240
  241 CTAYKDFMIS VARLIRKEKG LLIDENQLSL EMNRVMELEK EIASATTKPE DRNDPMLLYN 300
  301 KMTLAQIQNN FTLEIDGKPF SWSNFTNEIM STVNINIPNE EEVVVYAPEY LTKLKLILTK 360
  361 YSSRDLQNLM SWRFIMDLVS SLSRNYKESR NAFRKALYGT TSETATWRRC ANYVNGNMEN 420
  421 AVGRLYVEAA FAGESKHVVE DLITQIRAVF IQTLDDLTWM DAETKKKAEE KALAIKERIG 480
  481 YPDDIISNDS KLDNEYLELN YREDEYFENI IQNLKFSQNK QLKKLREKVD KDEWISGAAV 540
  541 VNAFYSSGRN QIVFPAGILQ PPFFSAQQSN SLNYGGIGMV IGHEITHGFD DNGRNFNKDG 600
  601 DLVDWWTQQS ANNFKDQSQC MVYQYGNFSW DLAGGQHLNG INTLGENIAD NGGIGQAYRA 660
  661 YQNYVKKNGE EKLLPGLDLN HKQLFFLNFA QVWCGTYRPE YAVNSIKTDV HSPGNFRIIG 720
  721 TLQNSPEFSE AFHCRKNSYM NPEKKCRVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle