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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73990680
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCSGAPKPP PPPPLLLLLL LALASQLCSP GVGADSEKPC SIPADKLLVI TVATKESDGF  60
   61 HRFMQSARYF NYTVKVLGQG EEWRGGDGIN SIGGGQKVRL MKEVMEHYAN QEDLVVLFTE 120
  121 CFNVIFAGGP EEVLKKFQKS NHKVVFAADG ILWPDKRLAD KYPIVHIGKR YLNSGGFIGY 180
  181 APNINQIVQQ WNLQDNDDDQ LFYTKIYIDP LKREAINITL DHKCKIFQTL NGAVDEVVLK 240
  241 FENGKARAKN VFYETLPVAV NGNGPTKILL NYFGNYVPNA WTQDNGCTLC DLDTIDLSTV 300
  301 DVHPNVTIGV FIEQPTPFLP RFLDILLTLD YPKEALKLFI HNKEVYHEKD IKVFFDKAKH 360
  361 EINTIKIVGP EENLSQAEAR NMGMDFCRQD ENCDYYFSMD ADVVLTNPRT LKILIEQNRK 420
  421 IIAPLVTRHG KLWSNFWGAL SPDGYYARSE DYVDIVQGNR VGIWNVPYMA NVYLIKGKTL 480
  481 RSEMNERNYF VRDKLDPDMA LCRNAREMGV FMYISNRHEF GRLLSTANYN TSHYNNDLWQ 540
  541 IFENPVDWKE KYINRDYSKI FTENIVEQPC PDVFWFPIFS EKACDELVEE MEHYGQWSGG 600
  601 KHHDSRISGG YENVPTDDIH MKQIDLENVW LHFIREFIAP VTLKVFAGYY TKGFALLNFV 660
  661 VKYSPERQRS LRPHHDASTF TINIALNNVG EDFQGGGCKF LRYNCSIESP RKGWSFMHPG 720
  721 RLTHLHEGLP VKNGTRYIAV SFIDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle