YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73990612
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYQRILCHQ GNSELFSFGG SDPKQDRFLP GDTTRVLLDY QLLQHTGLPM ARGQQVKGAV  60
   61 MLVEIIDPDH QEEVQVLLHP SSRKESGAGL EREADMLKEL HLFLLVVLLL VCAFFYQLSL 120
  121 KSSCFFCLPP QQLEQDPGAL LGNGHGIVFI ETSERMEPTP LVSCAVESAA KIYPRQPVAF 180
  181 FMKGLCNTTR LPSNSTYPGF SLLSAIDNVF LFPLDMKRLF EDTPLLSWYT HINTSAESNW 240
  241 LHVSSDASRL AIIWKYGGIY MDTDVISIRP IPEENFLAAQ SSRYSSNGVF GFLPHHPFLW 300
  301 ECMENFVEHY NSEIWGNQGP NLMTRMLRLW CKLRDFQEVS DLRCLNLSFL HPQRFYPISY 360
  361 PEWRRYYEVW DMDLSFNDSY ALHLWNYMNK EGRTVVRGSN TLVDNLCRKH CPRTYRDLIR 420
  421 GPEGGAPGKL GLASGEEEFS APESRRGRTG RAGRPGRGAA PRDELGEGPA HPRAALCCVC 480
  481 GDCSTSIPGL PAPAPSARPA SHSRGSRTQQ GIPPPPSVAD LKIACPGGAG ERLHPRLGGV 540
  541 GRRPGSPRRR RPWASSCGRG RRCCPRVRGV GGNGEGVPAP RRWGAPPARA GVRGAASGRS 600
  601 SREAGPGPSW GARTSGPLPA PEAPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle