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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73990573
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKQWVTAEL PVSSYLIESI AQQDACLEPE GTQHLVQGLS ALLDKAVCKP PPTPICFTGQ  60
   61 HLPSPAEQEK VVWDLQVKAK SLCAGFPLPG PRAAYNPACS QLSDLPLHGI RKLTIDYSRW 120
  121 PGKAWTLGAG YGKVSKYGDG NSGRNPGGSS DCEESSVTTG AKEYEGGQLY AVTPSLSIPS 180
  181 LNSFPSDGFR SGNSPCSLAP ERGRPSMSAA LLPQAGAARP RLGLLLLLSL SLHRGAVAKE 240
  241 LKFVTLVFRH GDRSPIETFP NDPIKEASWP QGFGQLTQLG MEQHYELGQY IKKRYGKFLN 300
  301 ESYKREQVYI QSTDVDRTLM SAMTNLAGLF PPEGISIWNP SLPWQPIPVH TLSLSEDRLL 360
  361 YLPFRDCPRF KELTEETLKS EEFQKRLHPY KDFIETLPTL TGYHTQDLFG MWTKVYDPLF 420
  421 CESVHNFTLP SWATEDTMTK LKELSELSIL SIYGIHKQKE KSRLQGGVLV SEILNHMKIA 480
  481 TQPSNHRKLI MYSAHDTTVS GLQMALDVYN GILPPYASCH IMELYLEKGE YFVEMYYRNE 540
  541 TQHEPYPLTL PGCTPSCPLT EFAELVAPVI PQDWSTECMT TSNDQVLRVY LAVAFCLVSG 600
  601 VLVVLLFTLL RHGPCWQRDP YRNI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle