YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73990292
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRTSVAL WSLLTGSRNS ERGCFRARIR PQLGALLQPP PVPCGVGPPC RRLASEAAES  60
   61 GSPEIKKPTF MDEEVQNLLI KMTGLNLQKV FKPAIQELKP PTYKLMTQAQ LEEATRKAIE 120
  121 AAKVRLKMPP VLEERVPIND VLAEDKILEG TETAKYVFTD ISYSIPHRER FIVVREPSGT 180
  181 LRKASWEERD RMIQIYFPKE GRRVLTPVIF KEENLRNMYS QDRHVDVLNL CVAQFEPDSA 240
  241 EYIKIHHQTY EDIDKHGKYD LLRSTRHFGG MAWYFVNKKK IDGLLIDQIQ RDLVDDATSL 300
  301 VQLYHILHPD GQSAQEAKEQ AAEGLHLIKV FAKTEAQKGA YIELTLQAYQ ETVISHSAAS 360
  361

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	360	0.99