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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73990022
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAECGRGGAA GGALPTSPGP ALGSKGALKP AAGEGGGGGG GGGGRLGHGR ARCDSGGVSN  60
   61 GDCSLGVSGD EARASPARGP RGAALAPAPG AAACPLPRES KPGGLPRRSS IIKDGTKQKR 120
  121 ERKKTVSFSS MPTEKKISSA SDCINSMVEG SELKKVRSNS RIYHRYFLLD ADMQSLRWEP 180
  181 SKKDSEKAKI DIKSIKEVRT GKNTDIFRSN GISDQISEDC AFSVIYGENY ESLDLVANSA 240
  241 DVANIWVTGL RYLISYGKHT LDMLESSQDN MRTSWVSQMF SEIDVDNLGH ITLCNAVQCI 300
  301 RDLNPGLKTS KIELKFKELH KSKDKAGTEV TKEEFVEVFH ELCTRPEIYF LLVQFSSNKE 360
  361 FLDTKDLMMF LEAEQGVAHI NEEISLEIIN KYEPSKEGQE KGWLSIDGFT KYLMSPDCYI 420
  421 FDPEHKKVCQ DMKQPLSHYF INSSHNTYLI EDQFRGPSDI TGYIRALKMG CRSVELDVWD 480
  481 GPDNEPVIYT GHTMTSQIVF RSVIDIINKY AFFASEYPLI LCLENHCSIK QQKVMVQHMK 540
  541 KILGDKLYTT LPNVEESYLP SPDVLKGRIL IKAKKLSSNC SGVEGDVTDE DEGAEMSQRM 600
  601 GKENVEQPNN VPVKRFQLCK ELSELVSICK SVQFKEFQVS FQVQKYWEVC SFNEVLASKY 660
  661 ANENPGDFVN YNKRFLARVF PSPMRIDSSN MNPQDFWKCG CQIVAMNFQT PGLMMDLNIG 720
  721 WFRQNGNCGY VLRPAIMREE VSFFSANTKD SVPGVSPQLL HIKIISGQNF PKPKGSGAKG 780
  781 DVVDPYVYVE IHGIPADCAE QRTKTVHQNG DAPIFDESFE FQINLPELAM VRFVVLDDDY 840
  841 IGDEFIGQYT IPFECLQTGY RHVPLQSLTG EVLAHASLFV HVAITNRRGG GKPHKRGLSV 900
  901 RKGKKSREYA SLRTLWIKTV DEVFKNAQPP IRDATDLREN MQVHSSCLQR CNAVVSFKEL 960
  961 CGLSSVANLM QCMLAVSPRF LGPDNTPLVV LNLSEQYPTM ELQGIVPEVL KKIVTTYDMM1020
 1021 IQSLKAVIEN ADAVYEKIVH CQKAAMEFHE HLHSIGTKEG LKERKLQKAV ESFTWNITIL1080
 1081 KGQADLLKYA KNETLENLKQ IHFAAVSCGL NKPGTENADV QKPRRSLEVI PEKANDETGD1140
 1141 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle