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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73989452
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLVHQQEDE DPSRGRGSTE SSRRPAGPWM AERSLQFCSE RHRAGTHRPE TTPARQEEVG  60
   61 KAERGDTPIY TNSSPAGRLA SAPGWLGTTG PTGRPPWGKG GSPQCRECQQ PRAGGRAERR 120
  121 ESRVPPAGVP GATELPLPCA RLEFGEAEQV AQPPPHLLRA PRGFGLVEEQ MDAQNSWRNN 180
  181 YHNDWLGPSR SPLPPGLAVP GTPQMDVGVY INHHTLSKKG ICEYLQGQQS SENLRDLGGS 240
  241 CHEVAGAQQK RISWRISNQH NAGARGRQAA VFKMTELDAD LDHIIPASVL PPFWAKLVVG 300
  301 FVSLVCFARS YDGDFVFDDS EAIINNKDLR ADTPLGDLWH HDFWGSRLSS NTSHKSYRPL 360
  361 TVLTFRINYY LSGGFHPMSF HVINILLHGG ISVLMVDVFS VLFGGLQYTS KGRRLNLAPR 420
  421 SSLLAALLFA VHPVHTECVA GVVGRADLLG ALFFLLSFLG YCKAFRESNK EGTHSTFWVL 480
  481 LSILLGAVAM LCKEQGITVL GLNAVFDILV IGKLNVLEMV QKVLHKDKSL EKTGILRNGG 540
  541 LLFRMTLLAS GGAGVLYMRW KIMGTGPPAF TEVDNPASFA DGMLVRAINY NYYYSLNAWL 600
  601 LLCPWWLCFD WSMGCIPLIK SAGDWRVTAP VALWLCLIGL ICQALCSEDS HRRRILTLGL 660
  661 GFLIIPFLPA SNLFFRVGFV VAERVLYLPS AGYCMLLTFG FGALSKHTKK KKLVAAVVLG 720
  721 ILFINMLRCM IRSGEWRNEE QLFRSALSVC PLNAKVHYNV GKNLADKGNQ TAAIRYYREA 780
  781 VRLNPKYVHA MNNLGNILKE RNELQEAEEL LSLAVQIQPD FAAAWMNLGI VQNSLKRFEA 840
  841 AEQSYRTAIK HRRKYPDCYY NLGRLYADLN RHVDALNAWR NATVLKPEHS LAWNNMIILL 900
  901 DNTGNLAQAE AVGREALELI PNDHSLMFSL ANVLGKSQKY KESEALFLKA IKAHPNAASY 960
  961 HGNLAVLYHR WGHLDLAKKH YEISLQLDPT ALGTKENYGL LRRKLEQMQK KNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle