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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73989022
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAALLLPQ EAAAAEQRDA RERLAFWDRR PDTTAPLTDR QTDSVLELKA AAENLPVPAE  60
   61 LPIEDLCSLA SQSRPIAQTS IVPESTEDIL LKGFTSLEME EERIETAQQF FSWFAKLQTQ 120
  121 MDQDEETKYR QMRDYLSGFQ EQCDAILNDV NNALQHLESL QKQYLFVSNK TGTLHEACEQ 180
  181 LLKEQSELVD LAENIQQKLS YFNELETINT KLNSPTLSVN SEGFIPMLAK LDDCITYISS 240
  241 HPNFKDYPVY LLKFKQCLSK ALHLMKTYTI NTLQNLTNQL LKRDPASIPN ADNAFTLFYV 300
  301 KFRAAAPKVR TLIEQIEQRS EKIPEYQQLL NDIHQCYLDQ RELLLGPSIT CTVTELTSQN 360
  361 NRDHCALIRS GCAFMVHVCQ DEHQLYNEFF TKPTSKLDEL LEKLCVSLYD VFRPLIIHVI 420
  421 HLETLSELCG ILKNEVLEDH VQNNAEQLGA FAAGVKQMLE DVQERLVYRT HIYIQTDITG 480
  481 YKPAPGDLAY PDKLVMMEQI ARSLKDEQKK VPSEASFSDV RLEETESNNL TKSGSTESLN 540
  541 PRPQTTISPA DLHGMWYPTV RRTLVCLSKL YRCIDRAVFQ GLSQEALSAC IQSLLGASES 600
  601 ISKNKTQIDG QLFLIKHLLI LREQIAPFHT EFTIKEISLD LKKTRDAAFK ILNPMTVPRF 660
  661 FRLNSNNALI EFLLEGTPEI REHYLDSKKD VDRHLKSACE QFIQQQTKLF VEQLEEFMTK 720
  721 VSALKTMASQ GGPKYTLSQQ PWAQPAKVSD LVTSVYKTIK AKLPLTLRSM SLYLSNKDTE 780
  781 FILFKPVRNN IQQVFQKFHV LLKEEFSPED VQIIACPSME QLNLLLSVCK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle