YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73988197
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTQGQKDMA WRLIALVLLL AWTAPTCRAR VRTDLLNVCM DAKHHKAKPG PEDKLHAQCT  60
   61 PWRKKACCTV STSQELHKDT SRLYNFTWDH CSKMEPACKR HFIQDNCLYE CSPNLGPWIQ 120
  121 EVNQSWRKER ILQVPLCRED CEQWWQDCRT SYTCKSNWHR GWNWTSGVNK CPARTTCRTF 180
  181 EAYFPTPAAL CEGIWDHSYK ATNYRRGSGR CIQMWFDPAQ GNPNEEVARF YAGARNAGVM 240
  241 PQGIEHLLLS LAPMLYLWLL GRV

Type	Start	End	Confidence
Signal Peptide	1	29	0.99
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	263	0.99