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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73987917
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTNASSSHP YWPRHLRLDN FVPNDCPTWH LLASLFSVSG VLVATTWLLS GSAVVMPLGT  60
   61 WRRLSLCWFA VCGFIHMVIE GWFSLYHEDL LGDQAFLSQL WKEYAKGDSR YILSDNFTIC 120
  121 MEAITACLWG PLSRWVVIAF LRQQPLSFLL QLVVSGPLFR NHLTKTCVTA LIAVTGREES 180
  181 RQLKRTSSET YQIKVINSET DIGVGLDDSV ITLAPTPQQS RAAETRAAET AAPGEGVPRV 240
  241 SWLPGNPVPA GDAQTPPGSA PSVRPRGGEP NRQAGAGLAA KAERRLCRQP PQPAARCPSR 300
  301 RVEQARERRG EDMALLCYNR GCGQRFDPET NSDDACTYHP GVPVFHDALK GWSCCKRRTT 360
  361 DFSDFLSIAG CTKGRHNSEK PPEPVKPEVK TTEKKELSEL KPKFQEHIIQ APKPVEAIKR 420
  421 PSPDEPMTNL ELKISASLKQ ALDKLKLSSG NEESKKEEDS DEIKIGTSCK NGGCTKTYQG 480
  481 LQSLEEVCVY HSGVPIFHEG MKYWSCCRRK TSDFNTFLAQ EGCTTGKHMW TKKDAGKKVV 540
  541 PCRHDWHQTG GEVTISIYAK NSLPELSQVV ANSTLLNVHI VFEGEKEFHQ NVKLWGVIDV 600
  601 TRSYVTMTAT KIEITMRKAE PMQWASLELP ATKKQEKQDT TE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle