YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73987455
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPISSCLSEL LFPYTSRAAD CVLDHLAIYR ESLLALVSDS EEERWQRRRR PSPSPLPPRW  60
   61 RSQDRSSQSD SDEERQEQQR RRWARRRRTH SWSPGSSASS SASPDRSQSP REAAAALSQQ 120
  121 QSLQERLRLR EERKQQEELM KAFETPEEKR ARRLAKKEAK ERKKREKMGW GEEYMGYTNT 180
  181 DNPFGDNNLL GTFIWNKALE KKGISHLEEK ELKERNKRIQ EDNRLELQKV KQLRLERERE 240
  241 KAMREQELEM LQREKEAEHF KTWEEQEDNF HLQQAKLRSK IRIRDGRAKP IDLLAKYISA 300
  301 EDDDLAVEMH EPYTFLNGLT VADMEDLLED IQVYMELEQG KNADFWRDMT TITEDEIAKL 360
  361 RKLEASGKGP GERREGVNAS VSSDVQSVFK GKTYSQLQVI FQGIEGKIRA GGPNLDMGYW 420
  421 ESLLQQLRAH MARARLRERH QDVLRQKLYK LKQEQGVESE PLFPILKQEP PSPGHSLEPE 480
  481 DPAPTPPGPS SEGGSAEPEA EGAAPVEGEA DGEAVLMEED LIQQSLDDYD AGKYSPRLLT 540
  541 AHELPLDAHV LEPDEDLQRL QLSRQQLQVT GDASESAEDI FFRRAKEGMG QDEAQFSVEM 600
  601 PLTGKAYLWA DKYRPRKPRF FNRVHTGFEW NKYNQTHYDF DNPPPKIVQG YKFNIFYPDL 660
  661 IDKRSTPEYF LEACPDNKDF ATLRFHAGPP YEDIAFKIVN REWEYSHRHG FRCQFANGIF 720
  721 QLWFHFKRYR YRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle