YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73987274
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLPLPPPA RHPPSSRAAF FTTLCSGFLM NRVDVMTDHY AEVDGNQGPR RAPGAWPSAL  60
   61 FAPRMQRWKA AALASVLCSS VLSIWMCRDG LLLSHRLGPA LAPLRRPPRT LDARIARLAQ 120
  121 YRALLQGAPD AVELRQLTPW AGGAAGPRRR AGPRRRRART GSRPCGLREL EVRVSELGLG 180
  181 YASDETVLFR YCAGACEAAA RVYDLGLRRL RQRRRVRRER VRAQPCCRPT AYEDEVSFLD 240
  241 AHSRYHTVHE LSARECACV

Type	Start	End	Confidence
Cytoplasmic	1	67	0.57
Transmembrane Helix	68	87	0.73
Non-Cytoplasmic	88	259	0.72