YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57102054
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALSGLASA LESYRGRDRL IRTLGYCCQL VGGVLVEQCP ARSEVGTRLL TLSSELSHCR  60
   61 TVLRLFDDVA MFIYTKQYGL GPEEEDSFVR CVSVLGNVAD QLYYPCEHIA WAADANILCV 120
  121 DSARWWTLST AFWGLSLLLG IARSLWLVLT LRRRLRSPVV AFTSRLPRSK RKAMEAQVRS 180
  181 EVLAVLSNLA DLANAVHWLP RGVLWAGRFP PWLVGLLGTV SSLLSVYQAV QAGGGEAAAT 240
  241 P

Type	Start	End	Confidence
Non-Cytoplasmic	1	129	0.75
Transmembrane Helix	130	147	0.95
Cytoplasmic	148	208	0.75
Transmembrane Helix	209	230	0.80
Non-Cytoplasmic	231	241	0.60