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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73986991
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQSGRSRHQ KRARAQAQLR NLEAYAAQPH SFVFARGRAG RGVRQLSLDL RRVMEPLTAT  60
   61 RLQIRKKNTL KDCVAVAGPL GVTHFLILSK TETNIYFKLM RLPGGPTLTF RINKYTLVRD 120
  121 VVSSLRRHRM HEQQFAHPPL LVLNSFGPHG MHVKLMATMF QNLFPSINVH KVNLNTIKRC 180
  181 LLINYNPDSQ ELDFRHYSIK VVPVGASRGM KKLLQEKFPN MSRLQDISEL LATGAGLSES 240
  241 EAEPDGEHNI TELPQAVAGR GNMRAQQSAV RLTEIGPRMT LQLIKIQEGV GEGNVLFHSF 300
  301 VHKTEEELQA ILAAKEEKLR LKAQRQDQQA QNVQRKREQR EAHKKKSLAG MKRTRAEASG 360
  361 DSDAEDPGAP PETEGAGQQE EEEDEAEYFR QAVGEEPDED MFPKAAKRGQ FTGPPGKKPR 420
  421 GKERRPDGGA LTCSANFSVE IDREFSRFQA AFLCPMLVVE FLVAVASNGL AFYRFVTREQ 480
  481 RPWHPAVVFS AQLAISDLLY ALTLLPLAAY FYPPKNWQYG EFACRLERFL FTCNLLGSVI 540
  541 FVTCISLNRY LGIVHPFFTR SSWRPKHAWA VSAAGWALAA LLAAPTLSFS HLKRPQREGS 600
  601 CVTERPEACT KCLGMADDLR LEAYRAYTLV LAVLGCGVPL LLTLTAYSAL GWAVLRSHGM 660
  661 TAAEKLRVAA LVASSLALYA SSYVPYYITQ VLNVQARQRW RARCPGFASL NEAKAAVDQM 720
  721 TYRTHQIMRG LMPLAICIHP LLYMAVAPSL GCCHQSCCSC SNSQMPEDTG NSGQVLPLNV 780
  781 TATPPKRGAL VP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle