YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73986398
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAQGVLWIL LGLLLRLEPG TATLPLLMDS VIQALAELEQ KVPATKASHV NGRGCCAKAR  60
   61 SPTTVDSLLV VTLARDLGLS FLQGPQTWSH AGLGTEGCWD QLSAPRTFTL LHSGTSPVTM 120
  121 AFLNGALDGV LLGDYLSRTP EPRPPLSHLL SEYYGAGVAG DPGFRSNFRR QNTAALTSTP 180
  181 TLTQQVWGAL ILLQRLEPTH PQLRGMSQEQ LAEVATNATK EFTEAFLGCP AIHPRCRWGA 240
  241 APYRGSPRSL QLPLGFLYVH HTYIPAPPCT DFAHCAADMR SMQHFHQDTR GWDDIGYSFV 300
  301 IGSDGYVYEG RGWHWVGAHT LGHNSRGFGV AFVGNYTAEL PTEAALRTVQ DVLPGCAVRA 360
  361 GFLRPDYTLL GHRQLVRTDC PGDALFNLLR TWPRFAASID SGNLGPDFSR STCNSPCPLS 420
  421 CSCTISAQP

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	429	0.99