YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57101758
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCCRPLRTE VGLAIALSIL ILFLFCLHVS PPTFQSSEEL RDNPKTLAWP TQPSRPLPTP  60
   61 CRANTSMAAL PGFSGQPQQV RDFLLHKHCR DFQLLQDVPL NKCSEPVFLL LVIKSSPKNY 120
  121 ERRELVRRTW GSERQVKGVQ LRRLFLVGTA PNPMEAHKVN RLLAMEAQAH GDILQWNFHD 180
  181 SFFNLTLKQV LFLQWQETRC TNASFVLNGD DDVFAHTDNM VSYLKDHNPD RHLFVGHLIR 240
  241 NVGPIRVTWS KYYVPKIVTE EERYPPYCGG GGFLLSRFTA AALRRAAPKL DLFPIDDVFL 300
  301 GMCLKKEGLE PASHGGIRTG GIRSPSGRIS SFDPCLYREL LLVHRFLPFE MLLMWDALSQ 360
  361 PKLICGKQSQ IY

Type	Start	End	Confidence
Signal Peptide	1	35	0.60
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	372	0.99