YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73986054
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPAEGAGYG REMMAASRLE LNLVRLLCRC EAMAAEKRDP EEWRLEKYVG ALEDMLQALK  60
   61 AQASKPASEV INEYSRKVDF LKGMLQAEKL TSASEKALAN QFLAPGRVPT TARERVPATK 120
  121 TVHLQSRARY TSEMRNELLG TQPSGKPKLD VRKRIGVAGP RSGDEKQSAA ELDVVLQRHQ 180
  181 DLQEKLAEEM LGLARSLKSN TLAAQSVIKK DNQTLSHSLK MADQNLEKLK TESERLEQHT 240
  241 QKSVNWLLWA MLIIVCFIFI SMILFIRIMP KLK

Type	Start	End	Confidence
Non-Cytoplasmic	1	245	0.92
Transmembrane Helix	246	266	0.97
Cytoplasmic	267	273	0.75