YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73985977
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGGWRWLR GLRAVGQPLF QGRALLVTNT LGCGTLMAAG DGVRQSWELR ARPGQKFDPR  60
   61 RSASMFAVGC SMGPFLHYWY LWLDHLLPAS GLSGLRNVLR KVLIDQLVAS PLLGIWYFLG 120
  121 IGCLEGQTLD ESCQELRDKF WEFYKADWCV WPAAQLVNFL FVPTQFRVTY INGLTLGWDT 180
  181 YLSYLKYRVS TVGGPGTQGT PQGPHV

Type	Start	End	Confidence
Cytoplasmic	1	18	0.56
Transmembrane Helix	19	40	0.84
Non-Cytoplasmic	41	61	0.48
Transmembrane Helix	62	82	0.88
Cytoplasmic	83	101	0.43
Transmembrane Helix	102	122	0.72
Non-Cytoplasmic	123	206	0.49